miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST048330
species: Brachypodium distachyon
source: PMRD, original name: bdi-miR2505

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCTAAGTCAATCTCTAAAT

miRNA*
 TCGGACATCAACTTAGATGC

mismatches: 6
bulges: 0
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pre-miRNA
 GGATCCCCTTTATATCCTGCTTCTAAGTCAATCTCTAAATTCACAAGTCAAATTCAATGCTTATATTTGATTTGTGGATTCGGACATCAACTTAGATGCG
GGATATAGGCGGGATCT

dot-bracket secondary structure
(((((((.((((((((((((.(((((((..((.((..((((((((((((((((...........))))))))))))))))..)).))..))))))).)))
))))))))).)))))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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